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Pathology - Intestinal blockage
Definition: A mechanical obstruction in a section of the intestine.
Epidemiology • Prevalent.
Aetiology • Small bowel obstruction: adhesions, hernias, intussusception, volvulus. • Large bowel obstruction: neoplasms, sigmoid volvulus, diverticular strictures.
Pathogenesis • Mechanical obstruction of the bowel inhibits normal peristaltic activity.
Presentation • Small bowel obstruction: severe colicky stomach pain, abdominal distension, initial vomiting, followed by complete constipation (absence of both flatus and feces). • Large bowel obstruction: severe colicky stomach pain, abdominal distension, initial absolute constipation, followed by subsequent vomiting.
Macroscopy The bowel anterior to the obstruction is typically distended. The primary reason of the obstruction is typically evident, such as adhesions, tumors, or intussusception.
Histopathology • Ischemic alterations may occur in extended cases. • Characteristics of the fundamental cause may also be observed.
Prognosis is contingent upon the underlying etiology. Benign causes of blockage typically exhibit a favorable prognosis with either spontaneous resolution or surgical intervention. Large intestinal obstruction resulting from colorectal cancer typically indicates advanced disease and a diminished prognosis.


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Pathology - Gastrointestinal infections
Campylobacter, Salmonella, Shigella, Escherichia coli • Prevalent bacterial etiologies of gastrointestinal infections. Mucosal biopsies typically reveal acute colitis characterized by the presence of neutrophils in the lamina propria and inside crypts.

Enterotoxigenic E. coli (ETEC) is a prevalent etiological agent of diarrhea in travelers. ETEC has fimbriae that enable the bacteria to attach to small bowel epithelial cells and secrete toxins, resulting in significant fluid loss.
Enterohaemorrhagic E. coli synthesizes a cytotoxin, resulting in haemorrhagic necrosis of the intestinal mucosa and bloody diarrhea. Vulnerable individuals, especially children, are at risk of developing thrombotic microangiopathy, resulting in hemolysis and acute renal failure (hemolytic uremic syndrome).

Clostridium difficile • A significant etiology of colitis frequently linked to the administration of broad-spectrum antibiotics in hospitalized individuals. The clinical presentation is diverse, spanning from mild diarrhea to severe colitis with potential for perforation and mortality. • Macroscopically, colitis results in the development of cream-colored pseudomembranes on the colonic mucosal surface. • Microscopically, crypts filled with neutrophils and mucus are enveloped by pseudomembranes consisting of fibrin and neutrophils.

Mycobacterium avium • Notable opportunistic pathogen in immunocompromised individuals. • A disseminated infection affecting the small and large intestine results in persistent diarrhea. Mucosal biopsy reveals significant infiltration of the lamina propria by macrophages with acid-fast bacilli.

Rotavirus is the predominant etiological agent of severe diarrhea in newborns and young children. • Transmission occurs via the faecal-oral route. • Immunity is acquired in childhood, rendering adult infections uncommon.

Norovirus • A prevalent etiological agent of epidemic gastroenteritis outbreaks. • Highly contagious, transmitted via contaminated food or drink, direct person-to-person interaction, and surface contamination. • Frequently observed in confined populations such as institutions, hospitals, and cruise ships.

Cytomegalovirus • Typically linked to immunocompromised states. Cytomegalovirus (CMV) infection significantly contributes to abrupt clinical decline in immunosuppressed individuals with inflammatory bowel disease. • Microscopically, the alterations range from modest inflammation to profound ulceration. CMV inclusions are present in endothelial and stromal cells.

Giardia lamblia • Protozoan transmitted through the use of water contaminated with the organism's cysts. The developed pathogen adheres to the brush edge of the epithelial cells of the upper small intestine. The inflammatory response induces a mild diarrheal condition that persists for approximately one week before resolution. Immunocompromised persons may experience persistent infections.

Entamoeba histolytica • Prevalent protozoal infection impacting around 10% of the global population. • Symptoms vary from mild diarrhea and stomach discomfort to severe fulminant colitis. The infection may spread to several areas, including the liver, and, infrequently, massive inflammatory tumors known as amoebomas may develop. • Mild instances exhibit neutrophilic infiltration only, but more severe cases are linked to profound ulceration of the gut. The organisms are spherical entities featuring a bean-shaped nucleus and a frothy cytoplasm that contains engulfed red blood cells.

Enterobius vermicularis Nematode pinworm transmitted via hand-to-mouth transfer of ova. • Larvae develop into adult organisms, primarily inhabiting the caecum. During nocturnal hours, female organisms travel to the anus to lay eggs, resulting in significant perianal pruritus.

Necator americanus with Ancylostoma duodenale Nematode hookworms that adhere to the jejunal mucosa. A pump mechanism is employed to extract blood and interstitial fluid from the host. Elevated worm burdens can result in substantial cumulative blood loss. Hookworm infection is the predominant cause of iron deficiency anemia globally.








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Pathology -Small Bowel Infarction
Definition: Ischaemic necrosis of a section of the small intestine. Epidemiology • Typically observed in those over 50 years of age.
Aetiology • Thrombosis associated with an unstable atherosclerotic plaque in the superior mesenteric artery. • Thromboemboli originating from the left ventricle or left atrium. • Hypovolemia.

Pathogenesis A sudden decrease in blood flow through the superior mesenteric artery results in ischemic necrosis of a portion of the small intestine. Massive hemorrhage into the infarcted colon results in hypovolemia. Bacteria swiftly infiltrate the necrotic gut wall, resulting in sepsis.

Presentation: • Sudden onset of intense stomach pain accompanied by hematochezia and hypovolemia.

Macroscopy The infarcted small intestine exhibits a dusky purple hue. Upon incision of the intestinal segment, substantial quantities of blood are observed within the lumen, and the mucosal surface appears fragile and necrotic. Histopathology • Complete thickness necrosis of the intestinal wall
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Prognosis • Timely laparotomy is crucial for the resection of the infarcted bowel segment. • Prognosis is typically unfavorable due to the swift onset of hypovolaemia and sepsis, leading to multiorgan failure.


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Pathology - Gastrointestinal anomalies
Oesophageal atresia occurs in 1 in 3,500 live births. • Outcomes from improper segmentation of the foregut into the tracheal and esophageal pathways during the initial month of embryonic development. • In most instances, there exists a link between the distal esophagus and the trachea referred to as a tracheoesophageal fistula. • Neonates exhibit coughing and choking during feeding. Approximately fifty percent of impacted infants exhibit other congenital anomalies, with heart problems constituting the predominant cause of mortality in infants diagnosed with oesophageal atresia.

Duodenal atresia is less prevalent than esophageal atresia. • Correlated with Down's syndrome in 30% of instances. • Resulting from the failure of epithelial apoptosis and inadequate canalization of the intestinal lumen by eight weeks of gestation. • The obstruction typically occurs distal to the ampulla of Vater. • Prenatal ultrasonography reveals dilatation of the proximal duodenum and stomach accompanied by polyhydramnios.

Exomphalos • A defect in the anterior abdominal wall at the umbilicus, resulting in the protrusion of abdominal contents through the umbilicus. • The protrusion is encased in a fragile, transparent sac formed by amniotic membrane and peritoneum. • Occurs due to the failure of the midgut to retract into the abdomen from the umbilical coelom during embryonic development.
Gastroschisis • A defect in the front abdominal wall located adjacent to the umbilicus, through which intestinal loops extrude. • In contrast to exomphalos, there is an absence of a protective covering sac.

Malrotation • Abnormal placement of the intestine and mesentery resulting from inadequate rotation of the growing gut as it retracts from the umbilical coelom to the abdomen during development. A malrotated bowel typically exhibits a constricted mesenteric base, increasing the risk of volvulus around the superior mesenteric artery. • Impaired arterial blood flow results in ischemic necrosis of the complete midgut, from the duodenum to the transverse colon. • Necrosis induces hemorrhage within the intestine and significantly increases the risk of perforation. • In the absence of immediate surgical intervention, the situation may be lethal.
Meckel's diverticulum • A remnant of the vitellointestinal duct, which connects the primitive gut to the yolk sac. • Estimated prevalence in the normal population • The mucosa of the diverticulum may exhibit regions of gastric or pancreatic tissue (heterotopia). • The majority of children with Meckel’s diverticulum are asymptomatic. • The predominant symptom is painless rectal hemorrhage resulting from ulceration in a diverticulum harboring acid-secreting gastric mucosa. • Small bowel obstruction may furthermore arise, associated with intussusception or incarceration.
Imperforate anus • Comprehensive designation for any atretic ailment affecting the rectum or anus. • Lesions vary in severity from a stenosed anal canal to anorectal agenesis. • Surgically, they are classified as either high or low anomalies, based on the termination level of the bowel relative to the pelvic floor. • Low defects are simpler to rectify, and post-operative function is favorable. Higher abnormalities are more challenging to rectify, as they are more prone to being linked with fistulae between the rectum and the genitourinary tract, in addition to a compromised pelvic floor.

Hirschsprung disease • Not precisely a deformity, but a congenital gastrointestinal disorder characterized by the absence of ganglion cells from a variable length of the intestinal wall. • Outcomes resulting from the inability of neuroblasts to move from the esophagus to the anal canal during gestational weeks 5 to 12. • The lack of ganglion cells results in spasms within the aganglionic segment. • It manifests as intestinal obstruction and an inability to pass meconium within 24 hours post-birth. The rectal suction biopsy is the definitive method for diagnosing Hirschsprung's disease. The primary characteristic is the lack of ganglion cells in the submucosa and the presence of unusually thick nerve fibers in the mucosal layer.


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Pathology - Malignant mesothelioma

It is a malignant tumor originating in the pleura from mesothelial cells, characterized by a diffuse growth pattern throughout the pleural surfaces.
Epidemiology • The majority of occurrences occur in males over 60 years of age. • The incidence continues to increase owing to the prolonged incubation period between asbestos exposure and tumor formation.
• The incidence is anticipated to reach its zenith between 2015 and 2020.
Aetiology Over 90% of instances can be directly linked to asbestos exposure. Amphibole asbestos is the most potent kind, succeeded by chrysotile, and subsequently amosite. • Additional potential causes encompass non-asbestos mineral fibers and therapeutic radiation.

Pathogenesis • Inhaled asbestos fibers stay permanently lodged in the lung. • The majority do not elicit a tissue response, and they are likely the fibers responsible for carcinogenic effects. A minority become enveloped in iron, resulting in the formation of asbestos bodies.

Presentation • Dyspnea, frequently resulting from a significant unilateral pleural effusion, accompanied by thoracic pain. • Marked weight loss and malaise are commonly observed.

Macroscopy • Initially, several tiny nodules are observed on the parietal pleura. • As the tumor progresses, the nodules coalesce to create a tumor mass that envelops the entire lung and adheres to the chest wall.

Cytopathology • Epithelioid mesotheliomas are more prone to disseminate into pleural fluid, where malignant cells are observed organizing into sheets, clusters, and papillae.

Histopathology • Epithelioid mesothelioma consists of spherical cells that create tubules and papillae. Sarcomatoid mesothelioma consists of elongated spindle-shaped cancerous cells. Biphasic mesothelioma comprises a combination of epithelioid and sarcomatoid variants. Desmoplastic mesothelioma is a variation characterized by a limited number of malignant cells embedded in highly dense collagenous tissue.

Prognosis: Extremely unfavorable

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Pathology – Pneumothorax
Definition • The accumulation of air in the pleural cavity.

Epidemiology: Prevalent. • Males are impacted more significantly than females.

Aetiology
Spontaneous pneumothorax generally manifests in slender, tall young males. The phenomenon is believed to originate from the rupture of small, fragile apical blebs in lung tissue caused by lung expansion. • Preexisting pulmonary conditions, such as COPD, asthma, pneumonia, tuberculosis, cystic fibrosis, sarcoidosis, lung cancer, and idiopathic pulmonary fibrosis (IPF). Uncommon disorders frequently linked to pneumothorax encompass pulmonary Langerhans cell histiocytosis, pulmonary lymphangioleiomyomatosis, and thoracic endometriosis. • Trauma, such as penetrating thoracic injury and rib fractures. • Iatrogenic, for instance, subclavian vein cannulation and lung biopsy.

Pathogenesis
Air escapes from the compromised lung into the pleural cavity until the pressures equilibrate. The lung collapses to a varying extent, contingent upon the magnitude of the pneumothorax. • Infrequently, the tissues next to the pulmonary lesion function as a unidirectional valve, obstructing pressure equalization. The persistent accumulation of pressure and volume in the pleural cavity displaces mediastinal structures, resulting in cardiorespiratory arrest (tension pneumothorax).

Presentation:
• Abrupt onset of unilateral pleuritic thoracic discomfort. • Breathlessness may occur, contingent upon the magnitude of the pneumothorax. Individuals with preexisting pulmonary conditions typically observe an exacerbation of their symptoms.

Radiology
• Air is present in the pleural space alongside various degrees of lung collapse. Histopathology: Apical lung tissue removed from patients with spontaneous pneumothoraces has one or more bullae linked to subpleural alveolar collapse and fibrosis. The superficial visceral pleura exhibits reactive mesothelial hyperplasia and inflammation, frequently characterized by an abundance of eosinophils.

Prognosis: Approximately one-third of patients with spontaneous pneumothorax experience recurring episodes, typically on the same side.


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Pathology - Pleural effusion
Definition: An accumulation of surplus fluid within the pleural cavity.
Epidemiology
• Ubiquitous.

Aetiology
• Left ventricular insufficiency. • Pneumonia. • Pulmonary embolism. • Neoplasm. • Systemic autoimmune disorders (e.g. lupus, rheumatoid arthritis).

Pathogenesis
• Augmented pulmonary venous congestion (left ventricular failure), pleural inflammation (pneumonia, pulmonary embolism, autoimmune illness), pleural infiltration (malignancy).

Presentation
• Minor effusions may be asymptomatic (though they may be detectable on imaging). • Significant effusions induce dyspnea. Macroscopy • Fluid is observed in the pleural cavity. • The fluid may be straw-colored, hemorrhagic, or purulent.

Cytopathology
Cytological analysis of pleural fluid under benign conditions reveals mesothelial cells and varying quantities of inflammatory cells, contingent upon the underlying etiology. Malignant pleural fluid may comprise malignant cells exhibiting enlarged pleomorphic nuclei. Prognosis: Parapneumonic effusions and those resulting from pulmonary emboli disappear with treatment. Pleural effusion resulting from left ventricular failure typically indicates advanced disease and a grim prognosis. Pleural effusion resulting from malignancy is generally attributable to metastatic illness, thereby indicating a very unfavorable prognosis.


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Pathology - Lung carcinoma
Definition • A malignant epithelial neoplasm originating in the lung.
Epidemiology • The most prevalent and lethal cancer, resulting in over 1 million fatalities per year.
Aetiology • As much as 90% of instances can be directly linked to smoking. Carcinogenesis • TP53 mutations are prevalent across all varieties of lung cancer. • Overexpression of HER2 and KRAS in adenocarcinomas. • Overexpression of EGFR and deletion of 3p in squamous cell carcinomas. • The inactivation of RB is nearly ubiquitous in small cell carcinomas.
Presentation• Symptoms associated with localized tumor growth encompass increasing dyspnea, cough, thoracic discomfort, dysphonia or voice loss, hemoptysis, weight reduction, and recurrent pneumonia. Metastases may result in abdominal pain, bone pain, and neurological problems. A minority of small cell carcinomas manifest with paraneoplastic syndromes or superior vena cava syndrome.
Macroscopy • A solid white/grey neoplastic tumor located within the lung. Yellow consolidation may be observed in the lung parenchyma distal to substantial proximal tumors as a result of obstructive pneumonia. Pleural puckering may be observed over peripheral tumors that have infiltrated the pleura. • Metastatic tumor deposits may be observed in hilar lymph nodes.
Histopathology
Adenocarcinoma is a malignant epithelial tumor characterized by glandular development and/or mucus secretion. Squamous cell carcinoma is a malignant epithelial tumor characterized by keratinization and/or intercellular bridges. Small cell carcinoma is a malignant epithelial neoplasm characterized by diminutive cells with minimal cytoplasm, poorly defined cell boundaries, finely granular chromatin, and the absence of nucleoli. The mitotic count is elevated, and necrosis is frequently widespread. Large cell carcinoma is an undifferentiated (non-small) cell carcinoma that exhibits no signs of squamous or glandular differentiation.
Prognosis: • Dismal, with 5-year survival rates ranging from 7% to 10% in the majority of countries.

TNM 7 pathological staging of lung carcinomas
Primary tumour (T)
T1a: tumour d 2cm in size, confi ned to the lung.
T1b: tumour > 2–3cm in size, confi ned to the lung.
T2: tumour 3–7cm in size; tumour of any size that involves the main
bronchus 2cm or more distal to the carina, invades visceral pleura,
causes partial atelectasis.
T3: tumour > 7cm in size; tumour of any size that invades the chest wall,
diaphragm, pericardium, mediastinal pleura, main bronchus <2cm distal< />pan>
to the carina, causes total atelectasis; multiple tumour nodules in same
lobe.
T4: tumour of any size that invades the mediastinum, heart, great vessels,
carina, trachea, oesophagus, vertebra; multiple tumour nodules in same
lung, but different lobes.
Regional lymph nodes (N)
N0: no regional lymph node metastasis.
N1: metastasis in ipsilateral peribronchial or hilar lymph nodes.
N2: metastasis in ipsilateral mediastinal or subcarinal lymph nodes.
N3: metastasis in contralateral mediastinal or hilar lymph nodes or any
scalene or supraclavicular lymph nodes


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Pathology - Hypersensitivity pneumonitis
Definition: An interstitial lung disease resulting from an immunological response to inhaled antigens. Synonyms include extrinsic allergic alveolitis. Various versions of the disease are referred to by numerous alternative names, such as farmer’s lung, humidifier lung, maple bark stripper’s lung, mushroom worker’s lung, pigeon breeder’s lung, and bird fancier’s lung, among others.
Epidemiology: Rare occurrence.

Aetiology: • Thermophilic bacteria (found in moldy hay, compost, and air conditioning ducts), • Fungi (present in moldy maple bark, barley, or wood dust). • Avian proteins (excrement and plumage of birds).

Pathogenesis: Inhaled antigens provoke an aberrant immune response in the pulmonary system. • Comprises a synthesis of antibody-mediated (type 2), immune complex-mediated (type 3), and cell-mediated (type 4) hypersensitivity reactions

. Presentation • Acute illness occurs upon exposure to substantial quantities of antigen, resulting in severe dyspnea, cough, and fever 4–6 hours post-exposure. Resolution transpires within 12 to 18 hours following the cessation of exposure. Chronic illness arises from extended exposure to little quantities of antigen, leading to a gradual onset of dyspnea, nonproductive cough, and exhaustion.

Radiology • High-resolution computed tomography (CT) reveals linear interstitial opacities and tiny nodules predominantly in the middle to upper lobes. • Frequently accompanied by traction bronchiectasis and honeycomb formations. Histopathology: Cellular chronic interstitial pneumonia with peribronchiolar accentuation. • Foci of organized pneumonia and ill-defined granulomas may also be observed.

Prognosis: Generally favorable if the culprit antigen is identified and exposure is prevented. Prolonged exposure may result in permanent pulmonary fibrosis and respiratory failure.


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Pathology - Diseases of the oral cavity
Candidiasis • A fungal illness prevalent among immunosuppressed individuals. • Clinically characterized by erythema and pseudomembrane development.

Actinomycosis • Gram-positive anaerobic bacteria that constitute a component of the normal oral flora, colonizing tonsillar crypts, dental plaque, and gingival tissues. • Pathological infection may arise if these organisms penetrate deeper tissues via trauma (e.g., tooth extraction).

Lichen planus • Frequently affects the oral cavity.Pemphigus vulgaris typically affects the oral cavity.

Mucous membrane pemphigoid, also referred to as cicatricial pemphigoid. Autoimmune blistering disease mostly impacting mucosal regions. • Manifestations occur between the ages of 50 and 70 years, characterized by mouth blistering. • Involvement of the conjunctiva, upper respiratory tract, and skin is also common. Histological examination reveals detachment of the squamous epithelium from the subjacent connective tissue accompanied by a heterogeneous inflammatory infiltrate. Direct immunofluorescence reveals linear deposition of IgG and C3 along the basement membrane zone.

Squamous papilloma • Benign exophytic growth of squamous epithelium. • Predominantly observed in people aged 30 to 50 years. • Preference for hard and soft palates, as well as the uvula. • Histological examination reveals papillary fronds covered by mature squamous epithelium.

Fibroma • Nonmalignant expansion of fibrous tissue due to inflammation. • The majority manifest as a painless oral mass in adults aged 30 to 50 years. Histological examination reveals a subepithelial mass composed of thick collagenous tissue.

Pyogenic granuloma • A benign vascular lesion more accurately referred to as 'lobular capillary hemangioma'. • Exhibits a dark red polypoid mass that frequently undergoes ulceration. • Histological examination reveals a lobulated proliferation of tiny blood vessels.

Squamous cell carcinoma • The most prevalent cancer of the oral cavity. • Significant correlation with alcohol consumption and tobacco use. • 30% present with regional lymph node metastases. • Cumulative 5-year survival around 50%


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